{-# LANGUAGE DeriveFoldable #-} {-# LANGUAGE DeriveFunctor #-} {-# LANGUAGE DeriveTraversable #-} {-# LANGUAGE GeneralizedNewtypeDeriving #-} {-# LANGUAGE NoImplicitPrelude #-} {-# LANGUAGE OverloadedStrings #-} {-# LANGUAGE TupleSections #-} module GA where -- MAYBE add factory floor optimizer: -- [2019-07-15] GA that optimizes factory floor -- - data: graph of workstations with edge weights being the number of walks between them -- - desired: optimal configuration that reduces crossings -- - space: 15 workstations that can be positioned in a 20 x 20 space import Control.Arrow hiding (first) import qualified Data.List as L import Data.List.NonEmpty ((<|)) import qualified Data.List.NonEmpty as NE import Data.Random import Data.Random.Distribution.Categorical import Data.Random.Sample import Pipes import Pretty import Protolude import Test.QuickCheck hiding (sample, shuffle) import Test.QuickCheck.Instances -- TODO Enforce this being > 0 type N = Int type R = Double -- alternative could be -- data I a -- = I -- { mutate :: m (I a), -- crossover1 :: (MonadRandom m) => I a -> m (Maybe (I a, I a)) -- } class Eq i => Individual i where {-| Generates a completely random individual given an existing individual. We have to add @i@ here as a parameter in order to be able to inject stuff. TODO This (and also, Seminar.I, which contains an ugly parameter @p@) has to be done nicer! -} new :: (MonadRandom m) => i -> m i {-| Generates a random population of the given size. -} population :: (MonadRandom m) => N -> i -> m (Population i) population 0 _ = undefined population n i = Pop . NE.fromList <$> replicateM n (new i) mutate :: (MonadRandom m) => i -> m i crossover1 :: (MonadRandom m) => i -> i -> m (Maybe (i, i)) -- TODO Perhaps rather add a 'features' function (and parametrize select1 etc. with fitness function)? fitness :: (Monad m) => i -> m R {-| Performs an n-point crossover. Given the function for single-point crossover, 'crossover1', this function can be derived through recursion and a monad combinator (which is also the default implementation). -} crossover :: (MonadRandom m) => Int -> i -> i -> m (Maybe (i, i)) crossover n i1 i2 | n <= 0 = return $ Just (i1, i2) | otherwise = do isM <- crossover1 i1 i2 maybe (return Nothing) (uncurry (crossover (n - 1))) isM -- TODO Perhaps use Data.Vector.Sized for the population? {-| It would be nice to model populations as GADTs but then no functor instance were possible: > data Population a where > Pop :: Individual a => NonEmpty a -> Population a -} newtype Population a = Pop {unPop :: NonEmpty a} deriving (Foldable, Functor, Semigroup, Show, Traversable) instance (Arbitrary i) => Arbitrary (Population i) where arbitrary = Pop <$> arbitrary {-| Selects one individual from the population using proportionate selection. -} proportionate1 :: (Individual i, MonadRandom m) => Population i -> m i proportionate1 pop = sequence ((\i -> (,i) <$> fitness i) <$> pop) >>= sample . fromWeightedList . NE.toList . unPop -- TODO Perhaps use stochastic acceptance for performance? {-| Selects @n@ individuals from the population using proportionate selection. -} -- TODO Perhaps use Data.Vector.Sized for the result? proportionate :: (Individual i, MonadRandom m) => N -> Population i -> m (NonEmpty i) proportionate n pop | n > 1 = (<|) <$> proportionate1 pop <*> proportionate (n - 1) pop | otherwise = (:|) <$> proportionate1 pop <*> return [] {-| Produce offspring circularly. -} children :: (Individual i, MonadRandom m) => N -> NonEmpty i -> m (NonEmpty i) children _ (i :| []) = (:| []) <$> mutate i children nX (i1 :| [i2]) = children2 nX i1 i2 children nX (i1 :| i2 : is') = (<>) <$> children2 nX i1 i2 <*> children nX (NE.fromList is') children2 :: (Individual i, MonadRandom m) => N -> i -> i -> m (NonEmpty i) children2 nX i1 i2 = do -- TODO Add crossover probability? (i3, i4) <- fromMaybe (i1, i2) <$> crossover nX i1 i2 i5 <- mutate i3 i6 <- mutate i4 return $ i5 :| [i6] {-| The @k@ best individuals in the population when comparing using the supplied function. -} bestsBy :: (Individual i, Monad m) => N -> (i -> m R) -> Population i -> m [i] bestsBy k f = fmap (NE.take k . fmap fst . NE.sortBy (comparing (Down . snd))) . traverse (\i -> (i,) <$> f i) . unPop {-| The @k@ worst individuals in the population. -} worst :: (Individual i, Monad m) => N -> Population i -> m [i] -- TODO (1 /) might not be stable regarding floating point precision worst = flip bestsBy (fmap (1 /) . fitness) {-| The @k@ best individuals in the population. -} bests :: (Individual i, Monad m) => N -> Population i -> m [i] bests = flip bestsBy fitness {-| Runs the GA and prints the @nResult@ best individuals. -} ga' nParents nX pop term nResult = do pop <- run nParents nX pop term res <- bests nResult pop sequence $ format <$> res where -- TODO this has to be done nicer format :: (Individual i, MonadIO m, Pretty i) => i -> m () format s = do f <- liftIO $ fitness s putText $ show f <> "\n" <> pretty s step :: (Individual i, MonadRandom m, Monad m) => N -> N -> Population i -> m (Population i) step nParents nX pop = do is <- proportionate nParents pop i :| is' <- children nX is iWorsts <- worst nParents pop let popClean = foldr L.delete (NE.toList . unPop $ pop) iWorsts return . Pop $ i :| is' <> popClean {-| Runs the GA, using in each iteration - @nParents@ parents for creating @nParents@ children and - @nX@-point crossover. It terminates after the termination criterion is fulfilled. -} run :: (Individual i, Monad m, MonadRandom m) => N -> N -> Population i -> Termination i -> Producer (Int, Maybe R) m (Population i) run nParents nX pop term = step' 0 pop where step' t pop | term pop t = return pop | otherwise = do pop' <- lift $ step nParents nX pop iBests <- lift $ bests 1 pop' case headMay iBests of Just iBest -> do f <- fitness iBest yield (t, Just f) Nothing -> yield (t, Nothing) step' (t + 1) pop' -- * Termination criteria {-| Termination decisions may take into account the current population and the current iteration number. -} type Termination i = Population i -> N -> Bool {-| Termination after a number of steps. -} steps :: N -> Termination i steps tEnd _ t = t >= tEnd